Mir-506-P10

MirGeneDB ID

Hsa-Mir-506-P10

Family name

MIR-506 (all species)

Seed

ACUUGGA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-890

Paralogues

Hsa-Mir-506-P1 Hsa-Mir-506-P2 Hsa-Mir-506-P3 Hsa-Mir-506-P4a1 Hsa-Mir-506-P4a2 Hsa-Mir-506-P4b Hsa-Mir-506-P5 Hsa-Mir-506-P6a1 Hsa-Mir-506-P6a2 Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P7a Hsa-Mir-506-P7b Hsa-Mir-506-P7c Hsa-Mir-506-P8 Hsa-Mir-506-P9 Hsa-Mir-506-P11 Hsa-Mir-506-P12 Hsa-Mir-506-P13 Hsa-Mir-506-P29

Orthologues

Mml-Mir-506-P10

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 145994285-145994341 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-506-P10)

Mir-506-P13 chrX: 145992760-145992816 [-] UCSC Ensembl
Mir-506-P10 chrX: 145994285-145994341 [-] UCSC Ensembl
Mir-506-P9 chrX: 145994794-145994850 [-] UCSC Ensembl
Mir-506-P11 chrX: 145996678-145996734 [-] UCSC Ensembl
Mir-506-P12 chrX: 145997208-145997264 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUACAAUCAGACAUGCUGUGGGAAGUGCCCUACUUGGAAAGGCAUCAGUUGCUUAGAUUACAUGUAACUAUUCCCUUUCUGAGUAGAGUAAGUCUUACCAAGUACAAGUUCAUGGUG

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Structure

        10          20        30        40        50        
CUACAAUCAGACAUGCU--|     AG   C     UG      CAUC      UUAGA 
                   GUGGGA  UGC CUACU  GAAAGG    AGUUGC     \
                   CAUUCU  AUG GAUGA  CUUUCC    UCAAUG     U
GUGGUACUUGAACAUGAAC^     GA   A     GU      CUUA      UACAU 
     110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Unknown

Motifs

UG at 5p(-14)

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-506-P10_5p

mirBase accession

MIMAT0004912

Sequence

0- UACUUGGAAAGGCAUCAGUUGC -22

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Proposed targets

microrna.org: MIMAT0004912
TargetScanVert: hsa-miR-890
TargetMiner: hsa-miR-890
miRDB: MIMAT0004912

Star sequence

Hsa-Mir-506-P10_3p*

mirBase accession

None

Sequence

35- AACUAUUCCCUUUCUGAGUAGA -57

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