MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-345

Family name MIR-345 (all species)
Seed CUGACUC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-345
Paralogues
Orthologues Bta-Mir-345  Cfa-Mir-345  Cpo-Mir-345  Dno-Mir-345  Ete-Mir-345  Mml-Mir-345  Mmu-Mir-345  Rno-Mir-345 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr14: 100307876-100307933 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUUAAGCAGAGACCCAAACCCUAGGUCUGCUGACUCCUAGUCCAGGGCUCGUGAUGGCUGGUGGGCCCUGAACGAGGGGUCUGGAGGCCUGGGUUUGAAUAUCGACAGCCUCUCUG
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Structure
        10           20        30         40        50        
AUGUUAAGCAGAGACCC---|     U      G  -       A  C        GUGAU 
                    AAACCC AGGUCU CU GACUCCU GU CAGGGCUC     G
                    UUUGGG UCCGGA GG CUGGGGA CA GUCCCGGG     G
GUCUCUCCGACAGCUAUAAG^     -      -  U       G  A        UGGUC 
      110       100         90         80        70        60
Deep sequencing
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CommentThe Dicer cut is shifted +1 relative to the other mammals.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-345_5p

mirBase accessionMIMAT0000772
Sequence
0- GCUGACUCCUAGUCCAGGGCUC -22
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Proposed targets microrna.org: MIMAT0000772
TargetScanVert: hsa-miR-345-5p
TargetMiner: hsa-miR-345-5p
miRDB: MIMAT0000772
Star sequence

Hsa-Mir-345_3p*

mirBase accessionMIMAT0022698
Sequence
36- GCCCUGAACGAGGGGUCUGGAG -58
Get sequence
Proposed targets TargetScanVert: hsa-miR-345-3p
TargetMiner: hsa-miR-345-3p
miRDB: MIMAT0022698