| MirGeneDB ID | Hsa-Mir-3085 |
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| Family name |
MIR-3085 (all species) |
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| Seed |
CUGGCUG |
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| Species |
Human (Homo sapiens) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-3085
Cfa-Mir-3085
Cpo-Mir-3085
Dno-Mir-3085
Ete-Mir-3085
Mml-Mir-3085
Mmu-Mir-3085
Ocu-Mir-3085
Rno-Mir-3085
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(hg38) |
chr10: 97875824-97875884 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCUACACGGUUGCCAACCCUACUCUGGGAAGGUGCCAUUCUGAGGGCCAGGAGUUUGAUUAUGUGUCACUCUGGCUGCUAUGGCCCCCUCCCAGGGUCUGGGUAUCACACCCAGGCCAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUCUACACGGUUGCCAA- U-| A U UCUGAG G UUGAUU
CCC ACUCUGGGA GG GCCAU GGCCAG AGU \
GGG UGGGACCCU CC CGGUA UCGGUC UCA A
UGACCGGACCCACACUAU UC^ C C UCG--- - CUGUGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| Comment | This gene is annotated on Ensembl (assembly GRCh38.p2) as gene AL139239.1. |
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ar |
Bl |
Bo |
Bo |
Bo |
Bo |
Bo |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Es |
Ga |
He |
He |
He |
He |
He |
Ki |
Li |
Lu |
Ly |
Mu |
Ne |
Pa |
Pl |
Pl |
Sk |
Sp |
Sp |
St |
Su |
Te |
Th |
To |
Tr |
Ve |
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| Star sequence |
Hsa-Mir-3085_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGUGCCAUUCUGAGGGCCAGGAGU -25
Get sequence
|
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| Mature sequence |
Hsa-Mir-3085_3p |
| mirBase accession | None |
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| Sequence |
40- UCUGGCUGCUAUGGCCCCCUC -61
Get sequence
|
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