MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-296

Family name MIR-296 (all species)
Seed GGGCCCC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-296
Paralogues
Orthologues Bta-Mir-296  Cfa-Mir-296  Cpo-Mir-296  Dno-Mir-296  Mml-Mir-296  Mmu-Mir-296  Rno-Mir-296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr20: 58817626-58817681 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGGAGGUGAGGAGAAAGGACCCUUCCAGAGGGCCCCCCCUCAAUCCUGUUGUGCCUAAUUCAGAGGGUUGGGUGGAGGCUCUCCUGAAGGGCUCUGAAGAGCGCUGCACCCGCA
Get precursor sequence
Structure
        10          20        30        40        50       
GUGGGAGGUGAGGAGAA--| GA      CA       C  C         GUUGUGC 
                   AG  CCCUUC  GAGGGCC CC CUCAAUCCU       C
                   UC  GGGAAG  CUCUCGG GG GGGUUGGGA       U
ACGCCCACGUCGCGAGAAG^ UC      UC       A  U         GACUUAA 
    110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-296_5p

mirBase accessionMIMAT0000690
Sequence
0- AGGGCCCCCCCUCAAUCCUGU -21
Get sequence
Proposed targets microrna.org: MIMAT0000690
TargetScanVert: hsa-miR-296-5p
TargetMiner: hsa-miR-296-5p
miRDB: MIMAT0000690
Star sequence

Hsa-Mir-296_3p*

mirBase accessionMIMAT0004679
Sequence
35- AGGGUUGGGUGGAGGCUCUCC -56
Get sequence
Proposed targets microrna.org: MIMAT0004679
TargetScanVert: hsa-miR-296-3p
TargetMiner: hsa-miR-296-3p
miRDB: MIMAT0004679