MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-15-P1a

Family name MIR-15 (all species)
Seed AGCAGCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-15a
Paralogues Hsa-Mir-15-P1b  Hsa-Mir-15-P1c  Hsa-Mir-15-P1d  Hsa-Mir-15-P2a  Hsa-Mir-15-P2b  Hsa-Mir-15-P2c  Hsa-Mir-15-P2d 
Orthologues Ami-Mir-15-P1a  Bta-Mir-15-P1a  Cfa-Mir-15-P1a  Cin-Mir-15-P1  Cli-Mir-15-P1a  Cmi-Mir-15-P1a  Cpi-Mir-15-P1a  Cpo-Mir-15-P1a  Dno-Mir-15-P1a  Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Ete-Mir-15-P1a  Gga-Mir-15-P1a  Gja-Mir-15-P1a  Gmo-Mir-15-P1a2  Lch-Mir-15-P1a  Loc-Mir-15-P1a  Mal-Mir-15-P1a2  Mdo-Mir-15-P1a  Mml-Mir-15-P1a  Mmu-Mir-15-P1a  Mun-Mir-15-P1a  Oan-Mir-15-P1a  Ocu-Mir-15-P1a  Rno-Mir-15-P1a  Sha-Mir-15-P1a  Spt-Mir-15-P1a  Sto-Mir-15-P1a  Tgu-Mir-15-P1a  Tni-Mir-15-P1a2  Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xtr-Mir-15-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(hg38)
chr13: 50049130-50049188 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1a)
Mir-15-P2a chr13: 50048984-50049048 [-] UCSC Ensembl
Mir-15-P1a chr13: 50049130-50049188 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUUAAAAAAAAUAAAACCUUGGAGUAAAGUAGCAGCACAUAAUGGUUUGUGGAUUUUGAAAAGGUGCAGGCCAUAUUGUGCUGCCUCAAAAAUACAAGGAUCUGAUCUUCUGAAGAAA
Get precursor sequence
Structure
        10          20        30        40        50         
GUUUAAAAAAAAUAAAA--|    GAGUAAAGUA        UA         GGAUUUU 
                   CCUUG          GCAGCACA  AUGGUUUGU       \
                   GGAAC          CGUCGUGU  UACCGGACG       G
AAAGAAGUCUUCUAGUCUA^    AUAAAAACUC        UA         UGGAAAA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-15-P1a_5p

mirBase accessionMIMAT0000068
Sequence
0- UAGCAGCACAUAAUGGUUUGUG -22
Get sequence
Proposed targets microrna.org: MIMAT0000068
TargetScanVert: hsa-miR-15a-5p
TargetMiner: hsa-miR-15a-5p
miRDB: MIMAT0000068
Star sequence

Hsa-Mir-15-P1a_3p*

mirBase accessionMIMAT0004488
Sequence
37- CAGGCCAUAUUGUGCUGCCUCA -59
Get sequence
Proposed targets microrna.org: MIMAT0004488
TargetScanVert: hsa-miR-15a-3p
TargetMiner: hsa-miR-15a-3p
miRDB: MIMAT0004488