MirGeneDB 2.1

MirGeneDB ID

Hme-Novel-1

Family name HME-NOVEL-1 (all species)
Seed UUCGCCU
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)
HE672018: 201434-201493 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CACGCUCAUGUAUUAGAUUGAAGAGGUUGAUGGCAGAGUACGAGGCGAAAGAGGUAUGUAGAGAUCUCUUUCGCCUCGAACACUGUCAUCAACCUCUUCAUACAUGCCCUCUGUGGAGUC
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Structure
        10          20        30        40        50         
CACGCUCAUGUAUUAGAU--|                 A  A            GGUAUG 
                    UGAAGAGGUUGAUGGCAG GU CGAGGCGAAAGA      U
                    ACUUCUCCAACUACUGUC CA GCUCCGCUUUCU      A
CUGAGGUGUCUCCCGUACAU^                 A  A            CUAGAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Novel-1_5p*

mirBase accessionNone
Sequence
0- UGGCAGAGUACGAGGCGAAAGA -22
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Mature sequence

Hme-Novel-1_3p

mirBase accessionNone
Sequence
38- UUUCGCCUCGAACACUGUCAUC -60
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