| MirGeneDB ID | Hme-Mir-971 |
|---|
| Family name |
MIR-971 (all species) |
|---|
| Seed |
ACUCUAA |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
|---|
| MiRBase ID |
hme-mir-971
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-971
Bge-Mir-971-v1
Bge-Mir-971-v2
Dan-Mir-971
Dme-Mir-971
Dmo-Mir-971
Dsi-Mir-971
Dya-Mir-971
Tca-Mir-971
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(Hmel_1) |
HE670834: 76896-76955 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAAAAAAGAAGCCGUAAGGAGCGACCGGCUCACUCUAAGUAUGAACGCCAAGCGUAUUGCAUAAAGCUUGGUGUUCUACCUUACAGUGAACUGUACGUUCUCUAUCAUCAAUGGAAGAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAAAAAGAAGCCGUAA--| AC C C UAU GUAUU
GGAGCG CGG UCACU UAAG GAACGCCAAGC G
UCUUGC GUC AGUGA AUUC CUUGUGGUUCG C
AAAGAAGGUAACUACUAUC^ AU A C CAU AAAUA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Hme-Mir-971_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CACUCUAAGUAUGAACGCCAAGC -23
Get sequence
|
|---|
| Co-mature sequence |
Hme-Mir-971_3p |
| mirBase accession | MIMAT0024998 |
|---|
| Sequence |
37- UUGGUGUUCUACCUUACAGUGAA -60
Get sequence
|
|---|
