MirGeneDB 2.1

MirGeneDB ID

Hme-Mir-2796

Family name MIR-2796 (all species)
Seed UAGGCCG
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-2796
Paralogues
Orthologues Aae-Mir-2796  Bge-Mir-2796  Tca-Mir-2796 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Hmel_1)
HE671853: 30010-30066 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGAAGAAAGAAGAACAGAGCACUAUCAUCAGGGGUUUCUUUCGGCCUUCAGCUGUUUAGACUGUAGGCCGGCGGAAACUACUUGCUGAUGGUGUUCCUAUCAACCGAACGAAGAA
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Structure
        10         20        30         40        50        
AAAGAAGAAAGAAGAACA-           U    -|      U       U   CUGU 
                   GAGCACUAUCA CAGG GGUUUCU UCGGCCU CAG    \
                   CUUGUGGUAGU GUUC UCAAAGG GGCCGGA GUC    U
AAGAAGCAAGCCAACUAUC           C    A^      C       U   AGAU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-2796_5p* (predicted)

mirBase accessionNone
Sequence
0- CAGGGGUUUCUUUCGGCCUUCAG -23
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Mature sequence

Hme-Mir-2796_3p (predicted)

mirBase accessionMIMAT0024962
Sequence
34- GUAGGCCGGCGGAAACUACUUGC -57
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