MirGeneDB 2.1

MirGeneDB ID

Gga-Mir-2984

Family name MIR-2984 (all species)
Seed GCCUGCU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-2984
Paralogues
Orthologues Cli-Mir-2984  Tgu-Mir-2984 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(Gallus_gallus.GRCg6a)
1: 145954986-145955052 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACUCCUGCAAUGAAAUACUUCACCUGCGGAGCCUGCUGAGAGUGAAAUUGAUAAAGUGCGGCACCAGCUCAGACAAUUUCACUCACAGCAGGCACUUGCAGGUGAAGCACUACCACAAAAUGGAGC
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Structure
        10         20         30        40        50        60   
GACUCCUGCAAUGAAAUA-          -| A        A           AUAAAGUGCGG 
                   CUUCACCUGC GG GCCUGCUG GAGUGAAAUUG           \
                   GAAGUGGACG UC CGGACGAC CUCACUUUAAC           C
CGAGGUAAAACACCAUCAC          U^ A        A           AGACUCGACCA 
     120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-2984_5p

mirBase accessionMIMAT0049894
Sequence
0- AGCCUGCUGAGAGUGAAAUUGA -22
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Star sequence

Gga-Mir-2984_3p*

mirBase accessionMIMAT0049895
Sequence
45- AAUUUCACUCACAGCAGGCACU -67
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