MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-1805

Family name MIR-1805 (all species)
Seed GUAUUGG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1805
Paralogues
Orthologues Aca-Mir-1805  Ami-Mir-1805  Cli-Mir-1805  Cpi-Mir-1805  Gja-Mir-1805-P3  Gja-Mir-1805-P4  Mdo-Mir-1805  Pbv-Mir-1805  Sha-Mir-1805  Spt-Mir-1805  Tgu-Mir-1805  Xla-Mir-1805-P1  Xla-Mir-1805-P2  Xtr-Mir-1805 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(Gallus_gallus.GRCg6a)		 1: 132328865-132328925 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUUUGUGAAAAAAGUGGAAUAUUCUGGGAGUUGUAGUCUUUCAAACAGAGCUUUGCAAGGACAUACCUGUAUUGGAACACUACAGCUCCCUGAACUUCCUCGCAGCACUGCCUGGGAAG
Get precursor sequence
Structure
        10           20        30        40         50         
CAGUUUGUGAAAAAAGU---|   UA   U            C      -    AGCUUUGC 
                    GGAA  UUC GGGAGUUGUAGU UUUCAA ACAG        A
                    CCUU  AAG CCCUCGACAUCA AAGGUU UGUC        A
GAAGGGUCCGUCACGACGCU^   C-   U            C      A    CAUACAGG 
 .       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1805_5p*
mirBase accessionMIMAT0007722
Sequence 
0- AGUUGUAGUCUUUCAAACAGA -21
Get sequence
Proposed targets TargetScanVert: gga-miR-1805-5p
miRDB: MIMAT0007722
Mature sequence

Gga-Mir-1805_3p
mirBase accessionMIMAT0007723
Sequence 
39- UGUAUUGGAACACUACAGCUCC -61
Get sequence
Proposed targets TargetScanVert: gga-miR-1805-3p
miRDB: MIMAT0007723