MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-1662

Family name MIR-1662 (all species)
Seed UGACAUC
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1662
Paralogues
Orthologues Aca-Mir-1662  Ami-Mir-1662  Cli-Mir-1662  Cpi-Mir-1662  Gja-Mir-1662-P3  Gja-Mir-1662-P4  Mun-Mir-1662  Pbv-Mir-1662  Spt-Mir-1662  Tgu-Mir-1662  Xla-Mir-1662-P1  Xla-Mir-1662-P2  Xtr-Mir-1662 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(Gallus_gallus.GRCg6a)		 2: 1911596-1911653 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGACGUCGUGCAUAGCUGUGCUCUAUGGGUUUGACAUCAUCAUACUUGGGAUGUAUGACACAAAGUCCCAAGCAGGCUGAUGUCAGGCCCAAGAUGGCUGCCAUCCUGUGUCGGUUUA
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Structure
        10           20        30         40        50        
GGACGUCGUGCAUAGCU---| GC   A              -  AUA        GUAUG 
                    GU  UCU UGGGUUUGACAUCA UC   CUUGGGAU     A
                    CG  AGA ACCCGGACUGUAGU GG   GAACCCUG     C
AUUUGGCUGUGUCCUACCGU^ GU   -              C  AC-        AAACA 
      110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1662_5p
mirBase accessionMIMAT0007543
Sequence 
0- UUGACAUCAUCAUACUUGGGAU -22
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Proposed targets TargetScanVert: gga-miR-1662
miRDB: MIMAT0007543
Star sequence

Gga-Mir-1662_3p*
mirBase accessionNone
Sequence 
36- CCCAAGCAGGCUGAUGUCAGGC -58
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