MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-1618

Family name MIR-1618 (all species)
Seed GAGCCCG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1618
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 8: 7822239-7822298 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAGCUCGAUUGGCAUCUGCUCUGCGUGCUGCAUCCUGGCUCCUGGCGUCCUGCACGUGCUAUUGGAGAGCCCGGAGCCAGGCUGCUGUUCUCCAGGCAGGAUAGCAGAGCUGCGGCUC
Get precursor sequence
Structure
        10          20         30        40         50         
UUCAGCUCGAUUGGCAU--    U   CGU-  U   U         U   G-|  UGCACG 
                   CUGC CUG    GC GCA CCUGGCUCC GGC  UCC      \
                   GACG GAC    UG CGU GGACCGAGG CCG  AGG      U
CUCGGCGUCGAGACGAUAG    -   CUCU  U   C         C   AG^  UUAUCG 
.       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1618_5p*
mirBase accessionMIMAT0026776
Sequence 
0- UGCAUCCUGGCUCCUGGCGUCC -22
Get sequence
Proposed targets TargetScanVert: gga-miR-1618-5p
miRDB: MIMAT0026776
Mature sequence

Gga-Mir-1618_3p
mirBase accessionMIMAT0007485
Sequence 
37- AGAGCCCGGAGCCAGGCUGCUGU -60
Get sequence
Proposed targets TargetScanVert: gga-miR-1618-3p
miRDB: MIMAT0007485