MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-430-P1  Ete-Mir-430-P2  Ete-Mir-430-P4  Ete-Mir-430-P5  Ete-Mir-430-P8 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)
JH980307: 56023156-56023216 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UUAAACCUUGUCAAGACUGGGCUCCCCACCACUUAAACGUGGAUGUACUUGCUUUGAGACGGAAAAAGUAAGUGCUUCCAUGUUUUAGUGAUGGUGAGUCUUUGUACUGUCCGCGUGCAUU
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Structure
        10          20        30        40        50          
UUAAACCUUGUCAAGACU--|     C   C    U         U         UUGAGA 
                    GGGCUC CCA CACU AAACGUGGA GUACUUGCU      \
                    UCUGAG GGU GUGA UUUGUACCU CGUGAAUGA      C
UUACGUGCGCCUGUCAUGUU^     U   A    U         U         AAAAGG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Ete-Mir-430-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- ACUUAAACGUGGAUGUACUUGCU -23
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Mature sequence

Ete-Mir-430-P3_3p

mirBase accessionNone
Sequence
38- UAAGUGCUUCCAUGUUUUAGUGA -61
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