| MirGeneDB ID | Ete-Mir-346 |
|---|
| Family name |
MIR-346 (all species) |
|---|
| Seed |
GUCUGCC |
|---|
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-346
Cfa-Mir-346
Cpo-Mir-346
Hsa-Mir-346
Mml-Mir-346
Mmu-Mir-346
Ocu-Mir-346
Rno-Mir-346
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(echTel2) |
JH980329: 19481279-19481336 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGCGUGGGGGAGGUCUCUGUGUUGGGCGCCUGUCUGCCCACCUGCCUGCCUCUCUGUCAUCUGAAGGAGGCAGGGGCCGGGCUGCAGCUGCCUGGGCAGAGCGGCUCCUGCGGAACGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGCGUGGGGGAGGUCUC---| G UG C CU A- UG CUGUC
UGU U GGCG CUGU GCCC CC CCUGCCUCU A
ACG G CCGU GACG CGGG GG GGACGGAGG U
CGCAAGGCGUCCUCGGCGAG^ - GU C U- CC -- AAGUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ete-Mir-346_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGUCUGCCCACCUGCCUGCCUCU -23
Get sequence
|
|---|
| Star sequence |
Ete-Mir-346_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- AGGCAGGGGCCGGGCUGCAGC -58
Get sequence
|
|---|
