MirGeneDB 2.1
MirGeneDB ID

Ete-Mir-335

Family name MIR-335 (all species)
Seed CAAGAGC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cpo-Mir-335  Dno-Mir-335  Hsa-Mir-335  Mml-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980321: 23378815-23378872 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GGCUGGGGGAAAGACUGCUUUGGGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCCCAAGGGCUCGCUGCGGUUGCGUGA
Get precursor sequence
Structure
        10          20        30        40        50        
GGCUGGGGGAAAGACUG--|      C        A         C        UUUGU 
                   CUUUGGG GGGGGUCA GAGCAAUAA GAAAAAUG     C
                   GGAACCC CCUCCAGU CUCGUUAUU CUUUUUGC     A
AGUGCGUUGGCGUCGCUCG^      U        C         A        CAAAU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-335_5p
mirBase accessionNone
Sequence 
0- UCAAGAGCAAUAACGAAAAAUG -22
Get sequence
Star sequence

Ete-Mir-335_3p*
mirBase accessionNone
Sequence 
36- UUUUUCAUUAUUGCUCCUGACC -58
Get sequence