MirGeneDB 2.1

MirGeneDB ID

Efe-Mir-2690-P3

Family name MIR-2690 (all species)
Seed GUGAAAG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2690-P1  Efe-Mir-2690-P2  Efe-Mir-2690-P4 
Orthologues Cte-Mir-2690 
Node of Origin (locus) E. fetida
Node of Origin (family) Annelida
Genome context
(Efe_combined)
Efet.01.1606222: 228-288 [-]
Precursor
(pre-Mir +30nt flank)
GAGAGAGAGAGAGAGAGAACACCGUAGGGAACACGGGUUUCACUGGCACCCAGUACGUUGGACAUUUGUGUGAAAGUGAGGCCAGUGUGGUCUACGCUUGGUCGCACCACAGUUCGAUCAU
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Structure
        10          20         30        40        50         
GAGAGAGAGAGAGAGAGAA--  C-|     GA    G         GG   C  GUACGU 
                     CA  CGUAGG  ACAC GGUUUCACU  CAC CA      U
                     GU  GCAUCU  UGUG CCGGAGUGA  GUG GU      G
UACUAGCUUGACACCACGCUG  UC^     GG    A         AA   U  UUACAG 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Star sequence

Efe-Mir-2690-P3_5p*

mirBase accessionNone
Sequence
0- ACACGGGUUUCACUGGCACCCA -22
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Mature sequence

Efe-Mir-2690-P3_3p

mirBase accessionNone
Sequence
38- UGUGAAAGUGAGGCCAGUGUGGU -61
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