MirGeneDB ID | Efe-Mir-1998-P1 |
---|---|
Family name | MIR-1998 (all species) |
Seed | UGAACGC |
Species | Common brandling worm (Eisenia fetida) |
MiRBase ID | |
Paralogues | Efe-Mir-1998-P2 |
Orthologues | Cte-Mir-1998 |
Node of Origin (locus) | E. fetida |
Node of Origin (family) | Annelida |
Genome context (Efe_combined) |
|
Precursor (pre-Mir +30nt flank) | ACGUUCAUGUCUGUUUUCAGACUGUUCAGUUCAAACUAGUUGAACGCAGAGAUGUACGUCAGet precursor sequence |
Structure | 10 20 --| U G U A - CAG ACGU CAU UCUGU UUCAG CU GUU \ UGCA GUA AGACG AAGUU GA CAA U AC^ U G C - U ACU 60 50 40 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Efe-Mir-1998-P1_5p* (predicted) |
mirBase accession | None |
Sequence |
0- ACGUUCAUGUCUGUUUUCAGACU -23
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|
Mature sequence | Efe-Mir-1998-P1_3p |
mirBase accession | None |
Sequence |
39- UUGAACGCAGAGAUGUACGUCA -61
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|