MirGeneDB 2.1

MirGeneDB ID

Efe-Mir-1998-P1

Family name MIR-1998 (all species)
Seed UGAACGC
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1998-P2 
Orthologues Cte-Mir-1998 
Node of Origin (locus) E. fetida
Node of Origin (family) Annelida
Genome context
(Efe_combined)
Precursor
(pre-Mir +30nt flank)
ACGUUCAUGUCUGUUUUCAGACUGUUCAGUUCAAACUAGUUGAACGCAGAGAUGUACGUCA
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Structure
          10        20           
--|   U   G     U     A  -   CAG 
  ACGU CAU UCUGU UUCAG CU GUU   \
  UGCA GUA AGACG AAGUU GA CAA   U
AC^   U   G     C     -  U   ACU 
60        50        40
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Efe-Mir-1998-P1_5p* (predicted)

mirBase accessionNone
Sequence
0- ACGUUCAUGUCUGUUUUCAGACU -23
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Mature sequence

Efe-Mir-1998-P1_3p

mirBase accessionNone
Sequence
39- UUGAACGCAGAGAUGUACGUCA -61
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