| MirGeneDB ID | Efe-Mir-1990-P1 |
|---|---|
| Family name | MIR-1990 (all species) |
| Seed | AAGUUGA |
| Species | Common brandling worm (Eisenia fetida) |
| MiRBase ID | |
| Paralogues | Efe-Mir-1990-P2 Efe-Mir-1990-P3 |
| Orthologues | Cgi-Mir-1990 Cte-Mir-1990-P1 Lan-Mir-1990 Lgi-Mir-1990 Npo-Mir-1990 |
| Node of Origin (locus) | Annelida |
| Node of Origin (family) | Lophotrochozoa |
| Genome context (Efe_combined) |
|
| Precursor (pre-Mir +30nt flank) | UAAGUUGACAUAGUCCCAAGGUUGGCGCCCGAUAAGUCUUGAGGCUGUGUACGCUUACGet precursor sequence |
| Structure | 10 20 - UG C ----| C UAAGU ACAUAGUC CAAG GUUGG \ AUUCG UGUGUCGG GUUC UAGCC G C CA A UGAA^ C 50 40 30 |
| Deep sequencing | |
| 3' NTU | Yes |
| Motifs | No |
| Mature sequence | Efe-Mir-1990-P1_5p |
| mirBase accession | None |
| Sequence |
0- UAAGUUGACAUAGUCCCAAGGU -22
Get sequence
|
| Star sequence | Efe-Mir-1990-P1_3p* |
| mirBase accession | None |
| Sequence |
36- UCUUGAGGCUGUGUACGCUUAC -58
Get sequence
|
