MirGeneDB 2.1
MirGeneDB ID

Efe-Mir-10-P3h

Family name MIR-10 (all species)
Seed CCCUGAG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-10-P1i  Efe-Mir-10-P1j  Efe-Mir-10-P2g  Efe-Mir-10-P2h  Efe-Mir-10-P2i  Efe-Mir-10-P2j  Efe-Mir-10-P2k  Efe-Mir-10-P3g  Efe-Mir-10-P3i  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Efe-Mir-10-P6  Efe-Mir-10-P7 
Orthologues Aae-Mir-10-P3  Asu-Mir-10-P3  Bfl-Mir-10-P3  Bge-Mir-10-P3  Bla-Mir-10-P3  Bpl-Mir-10-P3  Cgi-Mir-10-P3  Cin-Mir-10-P3  Cte-Mir-10-P3  Dan-Mir-10-P3  Dma-Mir-10-P3  Dme-Mir-10-P3  Dmo-Mir-10-P3  Dpu-Mir-10-P3  Dsi-Mir-10-P3  Dya-Mir-10-P3  Esc-Mir-10-P3  Isc-Mir-10-P3  Lan-Mir-10-P3  Lgi-Mir-10-P3  Nve-Mir-10  Obi-Mir-10-P3  Ovu-Mir-10-P3  Pmi-Mir-10-P3  Sko-Mir-10-P3  Spu-Mir-10-P3  Tca-Mir-10-P3  Xbo-Mir-10-P3 
Node of Origin (locus) E. fetida
Node of Origin (family) Eumetazoa
Genome context
(Efe_combined)		 Efet.01.1611524: 167-224 [+]
Precursor
(pre-Mir +30nt flank)
AAUGAAGGAAGUUAUUGGAAAAUAGCUCCUUCCCUGAGACUUUAACUUGUGAUUAAAUAAUCAUUCACAGGUCUCUUUCUCAGGAAGAGAGUGAUUUUCGUUAUGUCGAGCGUUCUAG
Get precursor sequence
Structure
        10          20         30        40        50        
AAUGAAGGAAGUUAUUG--      A    -|    C     CUUUA        UUAAA 
                   GAAAAU GCUC CUUCC UGAGA     ACUUGUGA     U
                   CUUUUA UGAG GAAGG ACUCU     UGGACACU     A
GAUCUUGCGAGCUGUAUUG      G    A^    -     UUCUC        UACUA 
      110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Mir-10-P3h_5p
mirBase accessionNone
Sequence 
0- UCCCUGAGACUUUAACUUGUGA -22
Get sequence
Star sequence

Efe-Mir-10-P3h_3p*
mirBase accessionNone
Sequence 
36- ACAGGUCUCUUUCUCAGGAAGA -58
Get sequence