MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-506-P1

Family name MIR-506 (all species)
Seed ACUCAGG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-506
Paralogues Dno-Mir-506-P2  Dno-Mir-506-P3  Dno-Mir-506-P7f  Dno-Mir-506-P7g  Dno-Mir-506-P7h  Dno-Mir-506-P7i 
Orthologues Bta-Mir-506-P1  Cfa-Mir-506-P1  Cpo-Mir-506-o1  Cpo-Mir-506-P1  Hsa-Mir-506-P1  Mml-Mir-506-P1  Mmu-Mir-506-P1  Ocu-Mir-506-P1  Rno-Mir-506-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH571138: 1950414-1950474 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAUCUUUAGCCACUCUGUGUGCAGUGCCCUACUCAGGAAGGUUCAGUUAAGUAUUUAGACUAUAAUAUUAACCGCACCCUUCUGAGUAGAGUAAUGCUCAACUAUGACGCCAUUUGGGGG
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Structure
        10          20        30        40        50          
CCAUCUUUAGCCACUCUG--| U   G   C          A   UCA     GUAUUUAG 
                    UG GCA UGC CUACUCAGGA GGU   GUUAA        \
                    AC CGU AUG GAUGAGUCUU CCA   CAAUU        A
GGGGGUUUACCGCAGUAUCA^ U   A   A          C   CGC     AUAAUAUC 
 .       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-506-P1_5p (predicted)

mirBase accessionMIMAT0047950
Sequence
0- UACUCAGGAAGGUUCAGUUAAGU -23
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Co-mature sequence

Dno-Mir-506-P1_3p (predicted)

mirBase accessionMIMAT0047951
Sequence
38- UUAACCGCACCCUUCUGAGUAGA -61
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