MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-430-P4

Family name MIR-430 (all species)
Seed AAGUGCU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-302d
Paralogues Dno-Mir-430-P1  Dno-Mir-430-P2  Dno-Mir-430-P3  Dno-Mir-430-P5  Dno-Mir-430-P6  Dno-Mir-430-P8 
Orthologues Ami-Mir-430-P4  Bta-Mir-430-P4  Cfa-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Cpo-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Mdo-Mir-430-P4  Mml-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Rno-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xtr-Mir-430-o4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH580080: 1519185-1519244 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P4)
Mir-92-P2a JH580080: 1519066-1519125 [-] UCSC Ensembl
Mir-430-P4 JH580080: 1519185-1519244 [-] UCSC Ensembl
Mir-430-P3 JH580080: 1519344-1519404 [-] UCSC Ensembl
Mir-430-P2 JH580080: 1519526-1519585 [-] UCSC Ensembl
Mir-430-P1 JH580080: 1519661-1519717 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGGCUUAAGCCAGAAAAGGGACCCCCUCUACUUUAACAUGGAAGCACUUGCUGUGAGCUAUUUUAUUAAGUGCUUCCAUGUUUGAGUGUGGUGAAUCCUACUUAACCUUCAAUUGUGUU
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Structure
        10          20         30        40        50         
UAGGCUUAAGCCAGAAAA--    CCC-| UC     U                CUGUGAG 
                    GGGA    CC  UACUU AACAUGGAAGCACUUG       C
                    UCCU    GG  GUGAG UUGUACCUUCGUGAAU       U
UUGUGUUAACUUCCAAUUCA    AAGU^ U-     U                UAUUUUA 
.       110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
To
Star sequence

Dno-Mir-430-P4_5p*

mirBase accessionMIMAT0047797
Sequence
0- ACUUUAACAUGGAAGCACUUGC -22
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Mature sequence

Dno-Mir-430-P4_3p (predicted)

mirBase accessionMIMAT0047798
Sequence
37- UAAGUGCUUCCAUGUUUGAGUGU -60
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