MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-302a
Paralogues Dno-Mir-430-P1  Dno-Mir-430-P2  Dno-Mir-430-P4  Dno-Mir-430-P5  Dno-Mir-430-P6  Dno-Mir-430-P8 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH580080: 1519344-1519404 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P3)
Mir-92-P2a JH580080: 1519066-1519125 [-] UCSC Ensembl
Mir-430-P4 JH580080: 1519185-1519244 [-] UCSC Ensembl
Mir-430-P3 JH580080: 1519344-1519404 [-] UCSC Ensembl
Mir-430-P2 JH580080: 1519526-1519585 [-] UCSC Ensembl
Mir-430-P1 JH580080: 1519661-1519717 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAAAUCUAUCAAGACUGGGCUCCCCACCACUUAAACGUGGAUGUACUUGCUUUAAAUCUAAAAAAGUAAGUGCUUCCAUGUUUUGGUGAUGGUGAGUCUUUUUACAUUUCAUGACUUCA
Get precursor sequence
Structure
        10          20        30        40        50          
UUCAAAUCUAUCAAGACU--|     C   C    U         U         UUAAAU 
                    GGGCUC CCA CACU AAACGUGGA GUACUUGCU      \
                    UCUGAG GGU GUGG UUUGUACCU CGUGAAUGA      C
ACUUCAGUACUUUACAUUUU^     U   A    U         U         AAAAAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Star sequence

Dno-Mir-430-P3_5p* (predicted)

mirBase accessionMIMAT0047791
Sequence
0- ACUUAAACGUGGAUGUACUUGCU -23
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Mature sequence

Dno-Mir-430-P3_3p (predicted)

mirBase accessionMIMAT0047792
Sequence
38- UAAGUGCUUCCAUGUUUUGGUGA -61
Get sequence