| MirGeneDB ID | Dno-Mir-378 |
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| Family name |
MIR-378 (all species) |
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| Seed |
CUGGACU |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
dno-mir-378
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-378
Cfa-Mir-378
Cpo-Mir-378
Ete-Mir-378
Hsa-Mir-378
Mml-Mir-378
Mmu-Mir-378
Ocu-Mir-378
Rno-Mir-378
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH565448: 58825-58884 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GCAGCCAGCGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUUGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCGCCUUCCCCACUCUCUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCAGCCAGCGGGUGACA- G-| C G C U GUUACC
GA CCAC CAGG CU CUGACUCCAGGUCC GUGU U
CU GGUG GUCC GA GACUGAGGUUCAGG CACG U
GGUCUCUCACCCCUUCCG GA^ A G A U AUAAAG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dno-Mir-378_5p* |
| mirBase accession | MIMAT0047858 |
|---|
| Sequence |
0- CUCCUGACUCCAGGUCCUGUGU -22
Get sequence
|
|---|
| Mature sequence |
Dno-Mir-378_3p |
| mirBase accession | MIMAT0047859 |
|---|
| Sequence |
38- ACUGGACUUGGAGUCAGAAGGC -60
Get sequence
|
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