Mir-376-P1

MirGeneDB ID

Dno-Mir-376-P1

Family name

MIR-376 (all species)

Seed

UAGAUUC

Species

Nine-banded armadillo (Dasypus novemcinctus)

MiRBase ID

dno-mir-376a

Paralogues

Dno-Mir-376-P2 Dno-Mir-376-P3 Dno-Mir-376-P4

Orthologues

Bta-Mir-376-P1 Cfa-Mir-376-P1 Cpo-Mir-376-P1 Ete-Mir-376-P1 Hsa-Mir-376-P1 Mml-Mir-376-P1 Mmu-Mir-376-P1 Ocu-Mir-376-P1 Rno-Mir-376-P1

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(dasNov3)

JH578221: 142061-142118 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-376-P1)

Mir-154-P7 JH578221: 124581-124639 [+] UCSC Ensembl
Mir-154-P13 JH578221: 125809-125864 [+] UCSC Ensembl
Mir-154-P2-v1 JH578221: 126266-126320 [+] UCSC Ensembl
Mir-154-P2-v2 JH578221: 126267-126319 [+] UCSC Ensembl
Mir-154-P8 JH578221: 127474-127530 [+] UCSC Ensembl
Mir-154-P30 JH578221: 128018-128073 [+] UCSC Ensembl
Mir-154-P3a-v1 JH578221: 128180-128235 [+] UCSC Ensembl
Mir-154-P3a-v2 JH578221: 128180-128235 [+] UCSC Ensembl
Mir-154-P26 JH578221: 128465-128522 [+] UCSC Ensembl
Mir-154-P4b JH578221: 129181-129240 [+] UCSC Ensembl
Mir-154-P4a JH578221: 129500-129559 [+] UCSC Ensembl
Mir-154-P18 JH578221: 131208-131263 [+] UCSC Ensembl
Mir-154-P29 JH578221: 131614-131668 [+] UCSC Ensembl
Mir-154-P22 JH578221: 133458-133515 [+] UCSC Ensembl
Mir-154-P19 JH578221: 135322-135379 [+] UCSC Ensembl
Mir-154-P23 JH578221: 141458-141514 [+] UCSC Ensembl
Mir-376-P2 JH578221: 141684-141741 [+] UCSC Ensembl
Mir-376-P1 JH578221: 142061-142118 [+] UCSC Ensembl
Mir-154-P9 JH578221: 146722-146784 [+] UCSC Ensembl
Mir-154-P17 JH578221: 147235-147292 [+] UCSC Ensembl
Mir-154-P21 JH578221: 147994-148057 [+] UCSC Ensembl
Mir-154-P27 JH578221: 148479-148537 [+] UCSC Ensembl
Mir-154-P31 JH578221: 152174-152227 [+] UCSC Ensembl
Mir-154-P16 JH578221: 152628-152685 [+] UCSC Ensembl
Mir-154-P10 JH578221: 155333-155390 [+] UCSC Ensembl
Mir-134 JH578221: 155647-155706 [+] UCSC Ensembl
Mir-154-P15 JH578221: 156384-156442 [+] UCSC Ensembl
Mir-154-P3b JH578221: 157215-157271 [+] UCSC Ensembl
Mir-154-P1 JH578221: 160400-160457 [+] UCSC Ensembl
Mir-154-P32 JH578221: 160728-160788 [+] UCSC Ensembl
Mir-154-P20-v2 JH578221: 161286-161341 [+] UCSC Ensembl
Mir-154-P20-v1 JH578221: 161287-161340 [+] UCSC Ensembl
Mir-154-P6 JH578221: 162674-162733 [+] UCSC Ensembl
Mir-541 JH578221: 164635-164700 [+] UCSC Ensembl
Mir-154-P14 JH578221: 165559-165614 [+] UCSC Ensembl
Mir-154-P5 JH578221: 165682-165737 [+] UCSC Ensembl
Mir-154-P12 JH578221: 165975-166030 [+] UCSC Ensembl
Mir-154-P25 JH578221: 166555-166610 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AGGACGGACUCCUUCUUUGGUAUUUAAAAGGUAGAUUCUCCUUCUAUGAGUACAUUAUUUAUGAUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCUUUGAAAACCU

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Structure

        10          20        30        40        50         
AGGACGGACUCCUUCUU--|      U    G  A    C    U      GUACAUUAU 
                   UGGUAUU AAAA GU GAUU UCCU CUAUGA         \
                   ACUAUGA UUUU CA CUAA AGGA GAUACU         U
UCCAAAAGUUUCGUCGUAA^      C    G  C    A    -      AAUUAGUAU 
      110       100        90        80         70        60

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Dno-Mir-376-P1_5p

mirBase accession

MIMAT0047850

Sequence

0- GUAGAUUCUCCUUCUAUGAGUA -22

Get sequence

Star sequence

Dno-Mir-376-P1_3p*

mirBase accession

MIMAT0047851

Sequence

37- AUCAUAGAGGAAAAUCCACGU -58

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