Mir-362-P1

MirGeneDB ID

Dno-Mir-362-P1

Family name

MIR-362 (all species)

Seed

AUCCUUG

Species

Nine-banded armadillo (Dasypus novemcinctus)

MiRBase ID

dno-mir-362

Paralogues

Dno-Mir-362-P2-v1 Dno-Mir-362-P2-v2 Dno-Mir-362-P4 Dno-Mir-362-P5

Orthologues

Bta-Mir-362-P1 Cfa-Mir-362-P1 Cpo-Mir-362-P1 Ete-Mir-362-P1 Hsa-Mir-362-P1 Mml-Mir-362-P1 Mmu-Mir-362-P1 Ocu-Mir-362-P1 Rno-Mir-362-P1

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(dasNov3)

JH569306: 1549504-1549562 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P1)

Mir-188-P2 JH569306: 1544821-1544879 [+] UCSC Ensembl
Mir-188-P1 JH569306: 1545145-1545204 [+] UCSC Ensembl
Mir-362-P2-v1 JH569306: 1548488-1548549 [+] UCSC Ensembl
Mir-362-P2-v2 JH569306: 1548489-1548548 [+] UCSC Ensembl
Mir-362-P1 JH569306: 1549504-1549562 [+] UCSC Ensembl
Mir-362-P5 JH569306: 1550649-1550711 [+] UCSC Ensembl
Mir-188-P3 JH569306: 1554037-1554096 [+] UCSC Ensembl
Mir-362-P4 JH569306: 1556109-1556167 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCUGAGCCUUCAUGUCUGCUCCCCCUCUCAAAUCCUUGGAACCUAGGUGUGAGUGCUGUUUCAAUGCAACACACCUAUUCAAGGAUUCAAGAGGCUGAGCCUUGUCUGCAUGUAGAAGG

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Structure

        10          20        30        40        50           
CCUGAGCCUUCAUGUCU--|   CC     CA          ACC        A-  GCUGU 
                   GCUC  CCUCU  AAUCCUUGGA   UAGGUGUG  GU     \
                   CGAG  GGAGA  UUAGGAACUU   AUCCACAC  CG     U
GGAAGAUGUACGUCUGUUC^   UC     AC          ---        AA  UAACU 
       110       100        90        80           70

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Dno-Mir-362-P1_5p

mirBase accession

MIMAT0047831

Sequence

0- AAUCCUUGGAACCUAGGUGUGAGU -24

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Star sequence

Dno-Mir-362-P1_3p*

mirBase accession

MIMAT0047832

Sequence

37- AACACACCUAUUCAAGGAUUCA -59

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