MirGeneDB 2.1
MirGeneDB ID

Dno-Mir-30-P2a

Family name MIR-30 (all species)
Seed GUAAACA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-30b
Paralogues Dno-Mir-30-P1a  Dno-Mir-30-P1b  Dno-Mir-30-P1d  Dno-Mir-30-P2b  Dno-Mir-30-P2d 
Orthologues Aca-Mir-30-P2a  Ami-Mir-30-P2a  Bta-Mir-30-P2a  Cfa-Mir-30-P2a  Cmi-Mir-30-P2a  Cpi-Mir-30-P2a  Cpo-Mir-30-P2a  Dre-Mir-30-P2a  Ete-Mir-30-P2a  Gga-Mir-30-P2a  Gja-Mir-30-P2a  Gmo-Mir-30-P2a  Hsa-Mir-30-P2a  Lch-Mir-30-P2a  Loc-Mir-30-P2a  Mal-Mir-30-P2a  Mdo-Mir-30-P2a  Mml-Mir-30-P2a  Mmu-Mir-30-P2a  Mun-Mir-30-P2a  Oan-Mir-30-P2a  Ocu-Mir-30-P2a  Pbv-Mir-30-P2a  Rno-Mir-30-P2a  Sha-Mir-30-P2a  Spt-Mir-30-P2a  Sto-Mir-30-P2a  Tgu-Mir-30-P2a  Tni-Mir-30-P2a  Xla-Mir-30-P2a1  Xla-Mir-30-P2a2  Xtr-Mir-30-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)		 JH569858: 1744469-1744528 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-30-P2a)		 Mir-30-P2a JH569858: 1744469-1744528 [-] UCSC Ensembl
Mir-30-P1a JH569858: 1749094-1749156 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCCUACCUUUAAACCAAGUUUCAGGUCAUGUAAACAUCCUACACUCAGCUGUGAUGUGUGGAUUGGCUGGGAGGUGGAUGUUUACUUCAACUGACUUGGAAUCUCAGCCAGUGAAUCU
Get precursor sequence
Structure
        10        20        30             40         50         
AGUCCUACCUUUAAACCAAGU         U-----|         U  A-       GUGAUG 
                     UUCAGGUCA      GUAAACAUCC AC  CUCAGCU      U
                     AGGUUCAGU      CAUUUGUAGG UG  GGGUCGG      G
UCUAAGUGACCGACUCUA---         CAACUU^         -  GA       UUAGGU 
.       110          100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Dno-Mir-30-P2a_5p
mirBase accessionMIMAT0047558
Sequence 
0- UGUAAACAUCCUACACUCAGCU -22
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Star sequence

Dno-Mir-30-P2a_3p*
mirBase accessionMIMAT0047559
Sequence 
38- CUGGGAGGUGGAUGUUUACUUC -60
Get sequence