MirGeneDB 2.1
MirGeneDB ID

Dno-Mir-135-P1

Family name MIR-135 (all species)
Seed AUGGCUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-135a-1
Paralogues Dno-Mir-135-P2  Dno-Mir-135-P4 
Orthologues Aca-Mir-135-P1  Ami-Mir-135-P1  Bta-Mir-135-P1  Cfa-Mir-135-P1  Cli-Mir-135-P1  Cmi-Mir-135-P1  Cpi-Mir-135-P1  Cpo-Mir-135-P1  Dre-Mir-135-P1  Ete-Mir-135-P1  Gga-Mir-135-P1  Gja-Mir-135-P1  Gmo-Mir-135-P1  Hsa-Mir-135-P1  Lch-Mir-135-P1  Loc-Mir-135-P1  Mal-Mir-135-P1  Mml-Mir-135-P1  Mmu-Mir-135-P1  Mun-Mir-135-P1  Oan-Mir-135-P1  Ocu-Mir-135-P1  Pbv-Mir-135-P1  Pma-Mir-135-o1  Rno-Mir-135-P1  Spt-Mir-135-P1  Sto-Mir-135-P1  Tgu-Mir-135-P1  Tni-Mir-135-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(dasNov3)		 JH567460: 186933-186992 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-135-P1)		 Let-7-P2c3 JH567460: 138459-138536 [-] UCSC Ensembl
Mir-135-P1 JH567460: 186933-186992 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCGGAGCAGCCCCAGGCCUCGCUGUUCUCUAUGGCUUUUUAUUCCUAUGUGAUUCUACUGCUCACUCAUAUAGGGAUUGGAGCCUUGGCGCACGGCGGGGACGGCCAACGGAGGGCUCU
Get precursor sequence
Structure
        10          20        30        40        50          
AGCGGAGCAGCCCCAGG--|        UCU   U      UU            UUCUAC 
                   CCUCGCUGU   CUA GGCUUU  AUUCCUAUGUGA      \
                   GGGGCGGCA   GGU CCGAGG  UAGGGAUAUACU      U
UCUCGGGAGGCAACCGGCA^        CGC   U      U-            CACUCG 
.       110       100        90        80         70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-135-P1_5p
mirBase accessionMIMAT0047639
Sequence 
0- UAUGGCUUUUUAUUCCUAUGUGA -23
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Star sequence

Dno-Mir-135-P1_3p*
mirBase accessionMIMAT0047640
Sequence 
38- AUAUAGGGAUUGGAGCCUUGGC -60
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