MirGeneDB 2.1

MirGeneDB ID

Dmo-Novel-9

Family name DMO-NOVEL-9 (all species)
Seed AAUGCAU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6308: 1301213-1301269 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUACAUGGCUCUAUAUUGAUAUACACAUAUAAAUGCAUACAUAAACACAUGUAUGUCUAUUUUUACAUGUGUUAUGUAUGCAUAUCUAUGUCUAUAUUGGAAUGCAUAGGUGCCUAA
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Structure
        10          20        30        40        50        
AUACAUGGCUCUAUAUU--|     C     UAA            A        UGUC 
                   GAUAUA ACAUA   AUGCAUACAUAA CACAUGUA    U
                   UUAUAU UGUAU   UACGUAUGUAUU GUGUACAU    A
AAUCCGUGGAUACGUAAGG^     C     CUA            -        UUUU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Novel-9_5p

mirBase accessionNone
Sequence
0- AAAUGCAUACAUAAACACAUGUA -23
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Star sequence

Dmo-Novel-9_3p*

mirBase accessionNone
Sequence
35- CAUGUGUUAUGUAUGCAUAUCU -57
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