MirGeneDB 2.1

MirGeneDB ID

Dmo-Novel-5-P5

Family name DMO-NOVEL-5 (all species)
Seed GCGAGCC
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues Dmo-Novel-5-P1a  Dmo-Novel-5-P1b  Dmo-Novel-5-P2  Dmo-Novel-5-P3  Dmo-Novel-5-P4 
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6308: 1309592-1309653 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAGAAAAAAUCUAAACUAAAACAUUUGUCUGCGAGCCAGAAUCUAGUGAAAUACGUUUUAGUUCGGGUAUCACUAGAUUCUAGGUCGUUGACAAAAUGCUUUGCUUUGCAACAGAAAAAUC
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Structure
        10         20         30         40        50        60
AUAGAAAAAAUCUAAAC-    A  -|     U    G  -            A  ACGUUU 
                  UAAA CA UUUGUC GCGA CC AGAAUCUAGUGA AU      U
                  GUUU GU AAACAG UGCU GG UCUUAGAUCACU UG      A
CUAAAAAGACAACGUUUC    C  A^     U    -  A            A  GGCUUG 
120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Novel-5-P5_5p

mirBase accessionNone
Sequence
0- UGCGAGCCAGAAUCUAGUGAAAU -23
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Star sequence

Dmo-Novel-5-P5_3p*

mirBase accessionNone
Sequence
40- UCACUAGAUUCUAGGUCGUUGA -62
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