| MirGeneDB ID | Dmo-Mir-971 |
|---|
| Family name |
MIR-971 (all species) |
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| Seed |
UGGUGUU |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-971
Bge-Mir-971-v1
Bge-Mir-971-v2
Dan-Mir-971
Dme-Mir-971
Dsi-Mir-971
Dya-Mir-971
Hme-Mir-971
Tca-Mir-971
|
|---|
| Node of Origin (locus) |
Neoptera
|
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| Node of Origin (family) |
Neoptera
|
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Genome context
(Dmoj_caf1) |
scaffold_6328: 350127-350186 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGAAAAUAUCAGAAAUGAACGUUGCGACCGCUGUAAAUUGUAAUCAUCAAAGCGUCUGCUAAAUCGCUUGGUGUUACUUCUUACAGUGAGCGCGGCGCUCGAAACUACAGUGAAACUAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAGAAAAUAUCAGAAAU--| A AC AUU U A CGUCUG
GA CGUUGCG CGCUGUAA GUAA CAUCAA G C
CU GCGGCGC GUGACAUU CAUU GUGGUU C U
GAUCAAAGUGACAUCAAAG^ C GA CUU - - GCUAAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dmo-Mir-971_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCUGUAAAUUGUAAUCAUCAAAG -23
Get sequence
|
|---|
| Mature sequence |
Dmo-Mir-971_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UUGGUGUUACUUCUUACAGUGA -60
Get sequence
|
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