| MirGeneDB ID | Dmo-Mir-957 |
|---|
| Family name |
MIR-957 (all species) |
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| Seed |
GAAACCG |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Aae-Mir-957
Dan-Mir-957
Dme-Mir-957
Dsi-Mir-957
Dya-Mir-957-P1
Dya-Mir-957-P2
|
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| Node of Origin (locus) |
Diptera
|
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| Node of Origin (family) |
Diptera
|
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Genome context
(Dmoj_caf1) |
scaffold_6680: 22273703-22273770 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUUCUUCCCACAAAAUGCCCACAAUGGAUCUUAGUUUUAGACGUGUUUUGGUGUGCUUGGGAGUUUUGUUCCGAUUGAAACCGUCCAAAACUGAGGCCAAUUGUGAGGCGAAAGCAUCCAGAAGGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUUCUUCCCACAAAAU- - -| A A U UG GUGCUUGGGA
GCC CACAA UGG UCUUAGUUUU GACG GUUU GU \
CGG GUGUU ACC GGAGUCAAAA CUGC CAAA UA G
AAGGAAGACCUACGAAAG A A^ - C - GU GCCUUGUUUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dmo-Mir-957_5p* |
| mirBase accession | None |
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| Sequence |
0- CUUAGUUUUAGACGUGUUUUGGU -23
Get sequence
|
|---|
| Mature sequence |
Dmo-Mir-957_3p |
| mirBase accession | None |
|---|
| Sequence |
46- UGAAACCGUCCAAAACUGAGGC -68
Get sequence
|
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