MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-3-P3

Family name MIR-3 (all species)
Seed CACUGGG
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-318
Paralogues Dmo-Mir-3-P1  Dmo-Mir-3-P2 
Orthologues Dan-Mir-3-P3  Dma-Mir-3  Dme-Mir-3-P3  Dpu-Mir-3  Dsi-Mir-3-P3  Dya-Mir-3-P3 
Node of Origin (locus) Drosophila
Node of Origin (family) Pancrustacea
Genome context
(Dmoj_caf1)
scaffold_6540: 5225350-5225408 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAAAUGUGAUUAAGGAUUUCAAUUUAUGGGAUACACUAAGUUCAGUUUUGUCAGAUGUCCAAGCAUCACUGGGCUUUGUUUAUCUCAUAAGAGCGAAAUUUGUUCAACUUACGGGAC
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Structure
        10         20         30        40        50         
UUGAAAUGUGAUUAAGG-     AA-|          C  U         UU  UCAGAU 
                  AUUUC   UUUAUGGGAUA AC AAGUUCAGU  UG      \
                  UAAAG   GAAUACUCUAU UG UUCGGGUCA  AC      G
CAGGGCAUUCAACUUGUU     CGA^          U  U         CU  GAACCU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Mir-3-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- GGAUACACUAAGUUCAGUUUUG -22
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Mature sequence

Dmo-Mir-3-P3_3p

mirBase accessionMIMAT0008684
Sequence
37- UCACUGGGCUUUGUUUAUCUCA -59
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