MirGeneDB 2.1
MirGeneDB ID

Dme-Mir-4969

Family name MIR-4969 (all species)
Seed GGUAAAU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-4969
Paralogues
Orthologues Dsi-Mir-4969  Dya-Mir-4969 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_melanogaster_BDGP6)		 3R: 21798535-21798651 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-4969)		 Mir-999 3R: 21798249-21798308 [-] UCSC Ensembl
Mir-4969 3R: 21798535-21798651 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUGUUUUUGUAUGGAUUUUUCGGCGUGGCGGUAAAUUGAAUGAUGAGUGGGAGGAUGUCGCUGCCAUUGUUUGGUUGAUAAGGGAGCCUGGCGCACUAUUACCUGGCUCUCUGAAACGAGAGCCCACCUGUCAAUCAAUACCACCCCGCCGAUGCGACAUCAUCAUAAUAAUCAU
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Structure
        10        20          30        40        50        60        70        80         
AUAUGUUUUUGUAUGGAUUUU--|     U  C    AA    A    GA     AGGAUGUCGCUGCCAUUGUUUGGUUGAUAAGGGAG 
                       UCGGCG GG GGUA  UUGA UGAU  GUGGG                                   \
                       AGCCGC CC CCAU  AACU ACUG  CACCC                                   C
UACUAAUAAUACUACUACAGCGU^     C  A    --    A    UC     GAGAGCAAAGUCUCUCGGUCCAUUAUCACGCGGUC 
     170       160       150         140       130       120       110       100        90
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo He L3 Fe Fe La Wh
Mature sequence

Dme-Mir-4969_5p
mirBase accessionMIMAT0020195
Sequence 
0- CGGUAAAUUGAAUGAUGAGUGGGA -24
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Star sequence

Dme-Mir-4969_3p*
mirBase accessionMIMAT0020196
Sequence 
95- CCACCUGUCAAUCAAUACCACC -117
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