MirGeneDB 2.1
MirGeneDB ID

Dme-Mir-3-P3

Family name MIR-3 (all species)
Seed CACUGGG
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-318
Paralogues Dme-Mir-3-P1  Dme-Mir-3-P2 
Orthologues Dan-Mir-3-P3  Dma-Mir-3  Dmo-Mir-3-P3  Dpu-Mir-3  Dsi-Mir-3-P3  Dya-Mir-3-P3 
Node of Origin (locus) Drosophila
Node of Origin (family) Pancrustacea
Genome context
(Drosophila_melanogaster_BDGP6)		 3R: 10408308-10408365 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3-P3)		 Mir-2-P9-v1 3R: 10408148-10408216 [+] UCSC Ensembl
Mir-2-P9-v2 3R: 10408149-10408215 [+] UCSC Ensembl
Mir-3-P3 3R: 10408308-10408365 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGAAAAGGUCCUUCGGUUUCAGUUUAUGGGAUACACACAGUUCAGUUUUGUCACACUUCAAGCAUCACUGGGCUUUGUUUAUCUCAUGAGAGCGAAAUUUAUUCAACAGGAAACCU
Get precursor sequence
Structure
        10         20         30        40        50        
GAUGAAAAGGUCCUUCG-     AG-|          C   C        UU  UCACA 
                  GUUUC   UUUAUGGGAUA ACA AGUUCAGU  UG     C
                  UAAAG   GAGUACUCUAU UGU UCGGGUCA  AC     U
UCCAAAGGACAACUUAUU     CGA^          U   U        CU  GAACU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo He L3 Fe Fe La Wh
Star sequence

Dme-Mir-3-P3_5p*
mirBase accessionMIMAT0020844
Sequence 
0- GGAUACACACAGUUCAGUUUUG -22
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Mature sequence

Dme-Mir-3-P3_3p
mirBase accessionMIMAT0000410
Sequence 
36- UCACUGGGCUUUGUUUAUCUCA -58
Get sequence
Proposed targets microrna.org: MIMAT0000410
TargetScanFly: dme-miR-318