MirGeneDB 2.1

MirGeneDB ID

Dan-Mir-970

Family name MIR-970 (all species)
Seed CAUAAGA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-970  Dme-Mir-970  Dmo-Mir-970  Dsi-Mir-970  Dya-Mir-970  Hme-Mir-970  Tca-Mir-970 
Node of Origin (locus) Endopterygota
Node of Origin (family) Endopterygota
Genome context
(Dana_caf1)
scaffold_13117: 3438256-3438320 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUUAGUGGAAGAAAGGCAUUUGUUGCAGCUAGCGGGUGUUUUAUUUGGUAGCUGAUAUCGAAAGAAUCUAUCAUAAGACACACGCGGCUAUAAUCGAUGUCCUUAGAGUCUACAAGCUAAA
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Structure
        10          20        30        40        50        60   
UUUUUUUAGUGGAAGAAA--|     U    C    A   G        UU     GCUGAUAU 
                    GGCAUU GUUG AGCU GCG GUGUUUUA  UGGUA        C
                    CUGUAG UAAU UCGG CGC CACAGAAU  ACUAU        G
AAAUCGAACAUCUGAGAUUC^     C    A    -   A        --     CUAAGAAA 
   120       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Da
Star sequence

Dan-Mir-970_5p*

mirBase accessionNone
Sequence
0- AGCUAGCGGGUGUUUUAUUUGGUA -24
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Mature sequence

Dan-Mir-970_3p

mirBase accessionNone
Sequence
44- UCAUAAGACACACGCGGCUAU -65
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