MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-315

Family name MIR-315 (all species)
Seed UUUGAUU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-315
Paralogues
Orthologues Aae-Mir-315  Bge-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Cgi-Mir-315-v1  Cgi-Mir-315-v2  Csc-Mir-315  Dan-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Efe-Mir-315  Esc-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Lpo-Mir-315-P3  Lpo-Mir-315-P4  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1  Lpo-Mir-315-P6-v2  Npo-Mir-315  Obi-Mir-315  Ovu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Sko-Mir-315  Sme-Mir-315  Tca-Mir-315 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_522: 128181-128243 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-315)		 Mir-96-P2 CAPTEscaffold_522: 115197-115256 [-] Ensembl
Mir-315 CAPTEscaffold_522: 128181-128243 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUCAAUUUAUCACUUCCGGCGUCCACACCUUUUGAUUGUUGCUCAGAAAGCCCUUUGUUUAUCGAGUUGGCUUUCAAGUGACAAUCAAGUUGUGAAGGAUAGCCAUGAGCAUCAUUGCUGAA
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Structure
        10        20          30        40        50        60 
GAUCAAUUUAUCACUUCC   -    A-|  CU         UG  CA       CUUUGUU 
                  GGC GUCC  CAC  UUUGAUUGU  CU  GAAAGCC       U
                  CCG UAGG  GUG  GAACUAACA  GA  CUUUCGG       A
AAGUCGUUACUACGAGUA   A    AA^  UU         GU  A-       UUGAGCU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cte-Mir-315_5p
mirBase accessionMIMAT0009541
Sequence 
0- UUUUGAUUGUUGCUCAGAAAGCC -23
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Star sequence

Cte-Mir-315_3p* (predicted)
mirBase accessionNone
Sequence 
41- CUUUCAAGUGACAAUCAAGUUG -63
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