MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-2707

Family name MIR-2707 (all species)
Seed UACUUAU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2707
Paralogues
Orthologues Efe-Mir-2707-v1  Efe-Mir-2707-v2 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_105: 375781-375840 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGCCAUUGGUGAACUGUGUGUAAAGUGCCUGUCAAGCUGAUUAAGUAUUGAUGCAACACGAUGAAUACUUAUUCAGCUUCUGACAGUUGGUUUCCACAACUGAACAACACAUGCAACC
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Structure
        10          20        30          40        50        
UUGGCCAUUGGUGAACUG--    U   G GC      --|     U        G UGCA 
                    UGUG AAA U  CUGUCA  AGCUGA UAAGUAUU A    A
                    ACAC UUU G  GACAGU  UCGACU AUUCAUAA U    C
CCAACGUACACAACAAGUCA    C   G UU      CU^     U        G AGCA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Cte-Mir-2707_5p* (predicted)

mirBase accessionNone
Sequence
0- CUGUCAAGCUGAUUAAGUAUUGA -23
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Mature sequence

Cte-Mir-2707_3p

mirBase accessionMIMAT0013574
Sequence
36- AUACUUAUUCAGCUUCUGACAGUU -60
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