MirGeneDB ID | Cte-Mir-2703-P2 |
Family name |
MIR-2703 (all species) |
Seed |
GCUUUGA |
Species |
Polychaete worm (Capitella teleta) |
MiRBase ID |
cte-mir-2703-2
|
Paralogues |
Cte-Mir-2703-P1
|
Orthologues |
|
Node of Origin (locus) |
C. teleta
|
Node of Origin (family) |
C. teleta
|
Genome context (Capitella_teleta_v1.0) |
CAPTEscaffold_394: 5014-5071 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCAGCUCAGAGAAGACGGAACCAGUGACUUGAGCUUACGAAUCAUCAGCCAUUGCUCGCUUUGAAAUGCUUUGAUUUGUAAGCUCAGCAGGCGUGGUUUCAAAUGCAACAGAUGACCA
Get precursor sequence
|
Structure | 10 20 30 40 50
UCAGCUCAGAGAAGACG-- -| GAC UC C GCUCG
GAACCA GU UUGAGCUUACGAAUCA AGC AUU \
UUUGGU CG GACUCGAAUGUUUAGU UCG UAA C
ACCAGUAGACAACGUAAAC G^ GAC U- - AGUUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Cte-Mir-2703-P2_5p* |
mirBase accession | MIMAT0013567 |
Sequence |
0- GAGCUUACGAAUCAUCAGCCAUU -23
Get sequence
|
Mature sequence |
Cte-Mir-2703-P2_3p |
mirBase accession | MIMAT0013568 |
Sequence |
36- UGCUUUGAUUUGUAAGCUCAGC -58
Get sequence
|