MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-2703-P1

Family name MIR-2703 (all species)
Seed GCUUUGA
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2703-1
Paralogues Cte-Mir-2703-P2 
Orthologues
Node of Origin (locus) C. teleta
Node of Origin (family) C. teleta
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_12304: 452-509 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAGCCCAGAGAAGACGGAACCAGUGACUUGAGCUUACGAAUCAUCAGCCAUUGCUCGCUUUGAAAUGCUUUGAUUUGUAAGCUCAGCAGGCGUGGUUUCAAAUGCAACAGAUCACUA
Get precursor sequence
Structure
        10          20         30        40        50         
UCAGCCCAGAGAAGACG--      -| GAC                UC   C   GCUCG 
                   GAACCA GU   UUGAGCUUACGAAUCA  AGC AUU     \
                   UUUGGU CG   GACUCGAAUGUUUAGU  UCG UAA     C
AUCACUAGACAACGUAAAC      G^ GAC                U-   -   AGUUU 
      110       100        90        80         70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Cte-Mir-2703-P1_5p*

mirBase accessionMIMAT0013567
Sequence
0- GAGCUUACGAAUCAUCAGCCAUU -23
Get sequence
Mature sequence

Cte-Mir-2703-P1_3p

mirBase accessionMIMAT0013568
Sequence
36- UGCUUUGAUUUGUAAGCUCAGC -58
Get sequence