MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-2686-P3

Family name MIR-2686 (all species)
Seed AGAUGUU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2686b
Paralogues Cte-Mir-2686-P1  Cte-Mir-2686-P2 
Orthologues Efe-Mir-2686-o3 
Node of Origin (locus) C. teleta
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_174: 220806-220865 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2686-P3)
Mir-2686-P1 CAPTEscaffold_174: 220483-220549 [+] Ensembl
Mir-2686-P2 CAPTEscaffold_174: 220637-220693 [+] Ensembl
Mir-2686-P3 CAPTEscaffold_174: 220806-220865 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCAUACAUUCAAAAUGGCGGAUUUUAGUGCCUUUAUAUGGAACCAUCUAUCCUUAUAUCGAUUGGAAGAUGUUCUUUAUGUAGGCUCCUGUUCUUCCGCCCAAUUCCAACGUUGAUAU
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Structure
        10         20         30         40        50          
UAUCAUACAUUCAAAAU-      UUU-   U-|   U    U     C    A   UUAUA 
                  GGCGGA    UAG  GCCU UAUA GGAAC AUCU UCC     \
                  CCGCCU    GUC  CGGA GUAU UCUUG UAGA AGG     U
UAUAGUUGCAACCUUAAC      UCUU   CU^   U    U     -    -   UUAGC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
To
Star sequence

Cte-Mir-2686-P3_5p*

mirBase accessionNone
Sequence
0- GCCUUUAUAUGGAACCAUCUAUCC -24
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Mature sequence

Cte-Mir-2686-P3_3p

mirBase accessionMIMAT0013537
Sequence
37- AAGAUGUUCUUUAUGUAGGCUCC -60
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