MirGeneDB 2.1

MirGeneDB ID

Cpo-Mir-95-P1

Family name MIR-95 (all species)
Seed UCAAUGG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-95
Paralogues Cpo-Mir-95-P3  Cpo-Mir-95-P4 
Orthologues Bta-Mir-95-P1  Cfa-Mir-95-P1  Dno-Mir-95-P1  Hsa-Mir-95-P1  Mml-Mir-95-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)
scaffold_166: 785836-785892 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGGGGACUGUGAUGCUUAGCACAGUGGGCGCUCAAUAAAUGUUGGUUGAAUUAAGCUGCGUUAAAUUCAAUGGGUAUUUACUGAGCCCUCACUCUGUGCCAGACACUGAGAGGGAUC
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Structure
        10        20          30        40        50        
GGGGGACUGUGAUGCUUA    --|     C     A        G        AAGCU 
                  GCAC  AGUGGG GCUCA UAAAUGUU GUUGAAUU     \
                  CGUG  UCACUC CGAGU AUUUAUGG UAACUUAA     G
CUAGGGAGAGUCACAGAC    UC^     C     C        G        AUUGC 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Star sequence

Cpo-Mir-95-P1_5p* (predicted)

mirBase accessionMIMAT0046935
Sequence
0- CUCAAUAAAUGUUGGUUGAAUU -22
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Mature sequence

Cpo-Mir-95-P1_3p (predicted)

mirBase accessionMIMAT0046936
Sequence
35- UUCAAUGGGUAUUUACUGAGCC -57
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