MirGeneDB 2.1
MirGeneDB ID

Cpi-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-194-2
Paralogues Cpi-Mir-194-P1 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cpo-Mir-194-P2  Dno-Mir-194-P2  Dre-Mir-194-P2a  Dre-Mir-194-P2b  Ete-Mir-194-P2  Gja-Mir-194-P2  Gmo-Mir-194-P2a  Gmo-Mir-194-P2b  Hsa-Mir-194-P2  Lch-Mir-194-P2  Loc-Mir-194-P2  Mal-Mir-194-P2a  Mal-Mir-194-P2b  Mml-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Sha-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tni-Mir-194-P2a  Tni-Mir-194-P2b  Xla-Mir-194-P2c  Xla-Mir-194-P2d  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584847: 982519-982578 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-194-P2 JH584847: 982519-982578 [+] UCSC Ensembl
Mir-192-P2 JH584847: 983412-983475 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCCCUGCUGGAAGGUGAUGCCUAUUGGAUGUAACAGCAACUCCAUGUGGAAGGUUUCAUCCCUUUUCCAGUGGGGCUGCUGUUAUUUUUGAUAGGCUGUCAGGAGCGUCGCAUGGAGC
Get precursor sequence
Structure
        10         20         30        40        50          
GCCCCCUGCUGGAAGGU-   -|     UG  U         A      G     GGUUUC 
                  GAU GCCUAU  GA GUAACAGCA CUCCAU UGGAA      \
                  CUG CGGAUA  UU UAUUGUCGU GGGGUG ACCUU      A
CGAGGUACGCUGCGAGGA   U^     GU  U         C      -     UUCCCU 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-194-P2_5p
mirBase accessionMIMAT0037812
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
Star sequence

Cpi-Mir-194-P2_3p*
mirBase accessionMIMAT0037814
Sequence 
38- CCAGUGGGGCUGCUGUUAUUUU -60
Get sequence