MirGeneDB 2.1
MirGeneDB ID

Cpi-Mir-1677-P2

Family name MIR-1677 (all species)
Seed UUUGAAU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID
Paralogues Cpi-Mir-1677-o6  Cpi-Mir-1677-o7  Cpi-Mir-1677-o8  Cpi-Mir-1677-P1a1  Cpi-Mir-1677-P1a2  Cpi-Mir-1677-P1b  Cpi-Mir-1677-P4 
Orthologues Cli-Mir-1677-P2  Gga-Mir-1677-P2  Tgu-Mir-1677-P2 
Node of Origin (locus) Archelosauria
Node of Origin (family) Diapsida
Genome context
(chrPic1)		 JH584734: 2192414-2192475 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UACCAAUCUGGAGAAGAGCACCAUAGGCCUGAUCCAAAAGCUAUUAAAGUCAAUGGAAAGGGUCCCAUUGAUUUGAAUGGGCUUUGGAUCAGGCCCUAAUUGCACUGAUGUUCCUUUUACUA
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Structure
        10          20        30        40        50        60
UACCAAUCUGGAGAAGA--|  CCAUA             AG     A      AUGGAAA 
                   GCA     GGCCUGAUCCAAA  CUAUU AAGUCA       G
                   CGU     CCGGACUAGGUUU  GGUAA UUUAGU       G
AUCAUUUUCCUUGUAGUCA^  UAAUC             CG     G      UACCCUG 
120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Te Te Te To
Star sequence

Cpi-Mir-1677-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAUCCAAAAGCUAUUAAAGUCA -22
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Mature sequence

Cpi-Mir-1677-P2_3p (predicted)
mirBase accessionNone
Sequence 
40- AUUUGAAUGGGCUUUGGAUCAG -62
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