MirGeneDB 2.1
MirGeneDB ID

Cpi-Mir-146-P2

Family name MIR-146 (all species)
Seed GAGAACU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-146c
Paralogues Cpi-Mir-146-P1  Cpi-Mir-146-P4 
Orthologues Aca-Mir-146-P2  Ami-Mir-146-P2  Cli-Mir-146-P2  Cmi-Mir-146-P2  Ebu-Mir-146  Gga-Mir-146-P2  Gja-Mir-146-P2  Lch-Mir-146-P2  Mun-Mir-146-P2-v1  Mun-Mir-146-P2-v2  Pbv-Mir-146-P2  Pma-Mir-146  Spt-Mir-146-P2  Sto-Mir-146-P2  Tgu-Mir-146-P2  Xla-Mir-146-P2a  Xla-Mir-146-P2b  Xtr-Mir-146-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584586: 7426738-7426802 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGUGAUGAUCCAUAGCAGUUCCCAGCUCUGAGAACUGAAUUCCAUGGACUGGUUUCAGUUCUGUAUCUUCAGUCCAUGGUAGUCAGUUCUCUAGCUUGGCUGUAUCUAACUUCACAACUAGUA
Get precursor sequence
Structure
        10            20        30        40        50        60  
GAUGUGAUGAUCCAUAG----|  UU  C    CU         AUU          GUUUCAGU 
                     CAG  CC AGCU  GAGAACUGA   CCAUGGACUG        U
                     GUC  GG UCGA  CUCUUGACU   GGUACCUGAC        C
AUGAUCAACACUUCAAUCUAU^  --  U    U-         GAU          UUCUAUGU 
   120       110         100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-146-P2_5p
mirBase accessionMIMAT0037778
Sequence 
0- UGAGAACUGAAUUCCAUGGACUG -23
Get sequence
Star sequence

Cpi-Mir-146-P2_3p*
mirBase accessionMIMAT0037779
Sequence 
43- GUCCAUGGUAGUCAGUUCUCUA -65
Get sequence