MirGeneDB 2.1

MirGeneDB ID

Cli-Mir-9648

Family name MIR-9648 (all species)
Seed AUGCCAU
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-9648
Paralogues
Orthologues
Node of Origin (locus) C. livia
Node of Origin (family) C. livia
Genome context
(colLiv2)
scaffold226: 298722-298780 [-]
Precursor
(pre-Mir +30nt flank)
CUAAGAGAAUAUAUCUAUGAGAGGCCAUCUCAUGCCAUUAAUUUCUAAGCAGUCAAUGAGGAAUUCUGCUGUAGAAUUAAUGGCAAAAUAUGGCCCACUGUCUUGGGCAAAUAAAUGUU
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Structure
        10        20          30        40         50         
CUAAGAGAAUAUAUCUAUGAGA--|     CUCA           U   -    GUCAAUG 
                        GGCCAU    UGCCAUUAAUU CUA AGCA       \
                        CCGGUA    ACGGUAAUUAA GAU UCGU       A
UUGUAAAUAAACGGGUUCUGUCAC^     UAAA           -   G    CUUAAGG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-9648_5p

mirBase accessionMIMAT0038789
Sequence
0- CAUGCCAUUAAUUUCUAAGCA -21
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Co-mature sequence

Cli-Mir-9648_3p

mirBase accessionMIMAT0038790
Sequence
38- CUGUAGAAUUAAUGGCAAAAU -59
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