MirGeneDB 2.1

MirGeneDB ID

Cli-Mir-9622

Family name MIR-9622 (all species)
Seed CCGUCGG
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-9622
Paralogues
Orthologues
Node of Origin (locus) C. livia
Node of Origin (family) C. livia
Genome context
(colLiv2)
scaffold79: 5422822-5422880 [+]
Precursor
(pre-Mir +30nt flank)
GGAGUCGGACCAGCCGUGGGGAAGAUGCCGUGGGGGUUUCCCUGCCUGGGACCCGAGGUGUGAAGGGCCCGUCGGGGCUGACCCCCAUGGCAGCUGGCUCCUUCGCUCAGCUGGAACUU
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Structure
        10         20         30         40        50         
GGAGUCGGACCAGCCGU-    A-  A             U-|    CC    A CCGAGG 
                  GGGG  AG UGCCGUGGGGGUU  CCCUG  UGGG C      \
                  CCUC  UC ACGGUACCCCCAG  GGGGC  GCCC G      U
UUCAAGGUCGACUCGCUU    GG  G             UC^    U-    G GAAGUG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Cl Cl Cl Cl Cl To
Star sequence

Cli-Mir-9622_5p*

mirBase accessionMIMAT0038735
Sequence
0- UGGGGGUUUCCCUGCCUGGGAC -22
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Mature sequence

Cli-Mir-9622_3p

mirBase accessionMIMAT0038736
Sequence
37- CCCGUCGGGGCUGACCCCCAUG -59
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