MirGeneDB 2.1

MirGeneDB ID

Cli-Mir-2984

Family name MIR-2984 (all species)
Seed GCCUGCU
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-2984
Paralogues
Orthologues Gga-Mir-2984  Tgu-Mir-2984 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(colLiv2)
scaffold167: 918738-918804 [+]
Precursor
(pre-Mir +30nt flank)
CUCCCGCAAUGAGAGAUGCUUCACCUGCGGAGCCUGCUGGGAGCGAAAUUGAGAAAGGACAGCGCCAGCCCAGGCAAUUUCACUCACAGCGGGCACUUGCAGGUGAAGCAUGGCCAUAAAAUGCAGC
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Structure
        10         20         30        40        50        60   
CUCCCGCAAUGAGAGAU-           -| A        G   C       AGAAAGGACAG 
                  GCUUCACCUGC GG GCCUGCUG GAG GAAAUUG           \
                  CGAAGUGGACG UC CGGGCGAC CUC CUUUAAC           C
CGACGUAAAAUACCGGUA           U^ A        A   A       GGACCCGACCG 
     120       110       100        90        80        70
Deep sequencing
3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
 +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-2984_5p (predicted)

mirBase accessionMIMAT0038715
Sequence
0- AGCCUGCUGGGAGCGAAAUUGA -22
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Star sequence

Cli-Mir-2984_3p* (predicted)

mirBase accessionNone
Sequence
45- AAUUUCACUCACAGCGGGCACU -67
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