MirGeneDB 2.1

MirGeneDB ID

Cli-Mir-1559

Family name MIR-1559 (all species)
Seed UCGAUGC
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1559
Paralogues
Orthologues Gga-Mir-1559  Tgu-Mir-1559 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(colLiv2)
scaffold159: 524666-524725 [-]
Precursor
(pre-Mir +30nt flank)
UGAAUGUUGGACAUGAAGGUCUAGACUCCUUUCGAUGCUUGUAUGCUACUCCCAAGAAUGCUAACAGGAGUUCCAUGUAUGCAUCGAGCAGAGACUAUACCAUUUAAACUACAGCACGGA
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Structure
        10          20        30        40        50         
UGAAUGUUGGACAUGAA--|  C   A   CU        U      CU     CAAGAA 
                   GGU UAG CUC  UUCGAUGC UGUAUG  ACUCC      U
                   CCA AUC GAG  GAGCUACG AUGUAC  UGAGG      G
AGGCACGACAUCAAAUUUA^  U   A   AC        U      CU     ACAAUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-1559_5p

mirBase accessionMIMAT0038685
Sequence
0- UUCGAUGCUUGUAUGCUACUCC -22
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Star sequence

Cli-Mir-1559_3p* (predicted)

mirBase accessionMIMAT0038686
Sequence
38- AGUUCCAUGUAUGCAUCGAGCA -60
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