MirGeneDB 2.1
MirGeneDB ID

Cgi-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Pacific oyster (Crassostrea gigas)
MiRBase ID
Paralogues Cgi-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Hme-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Tca-Mir-216-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(CGI_GCA_000297895.1)		 scaffold1785: 69359-69417 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCAGGGUGAACGAGGCGACUGGUUGUCUAAUAUCAGCUGGUAAUCCUGAGCUGGCGACGACACUCAGGGUGCUCACUGAUAUACGAUAAACAGACCACCAUAUUGAACACAUCGGG
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Structure
        10        20          30        40        50         
CUGCCAGGGUGAACGAGGCGA--|  G     UA       CU    A       CUGGC 
                       CUG UUGUC  AUAUCAG  GGUA UCCUGAG     G
                       GAC AAUAG  UAUAGUC  UCGU GGGACUC     A
GGGCUACACAAGUUAUACCACCA^  A     CA       AC    -       ACAGC 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
A- D- D- Eg F- Gi He Ju L- Ma Ma Pe Re Sp Um Ea Fe Ha La Ma
Mature sequence

Cgi-Mir-216-P1_5p
mirBase accessionNone
Sequence 
0- UAAUAUCAGCUGGUAAUCCUGAG -23
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Star sequence

Cgi-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
37- CAGGGUGCUCACUGAUAUACGA -59
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