MirGeneDB ID | Cfa-Mir-95-P4 |
Family name |
MIR-95 (all species) |
Seed |
AAGUCUU |
Species |
Dog (Canis familiaris) |
MiRBase ID |
|
Paralogues |
Cfa-Mir-95-P1
Cfa-Mir-95-P2
Cfa-Mir-95-P3-v1
Cfa-Mir-95-P3-v2
|
Orthologues |
Bta-Mir-95-P4
Cpo-Mir-95-P4
Ete-Mir-95-P4
Hsa-Mir-95-P4
Mml-Mir-95-P4
Mmu-Mir-95-P4
Ocu-Mir-95-P4
Rno-Mir-95-P4
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (canFam3_add) |
chrX: 87401652-87401714 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAAUGUGUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAAUAAAUGAACCAACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAGAAAAAGCUACGACCCAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GAAUGUGUUUCUUCAUG---| GG C - U GAAAGAAU
CCU CAUAUAGCAGGU CUCAA UAAG AUUUGUU \
GGA GUGUAUUGUCCA GAGUU AUUC UGAACAA A
AGACCCAGCAUCGAAAAAGA^ G- C U - CCAAGUAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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Star sequence |
Cfa-Mir-95-P4_5p* |
mirBase accession | None |
Sequence |
0- AGGUCCUCAAUAAGUAUUUGUU -22
Get sequence
|
Mature sequence |
Cfa-Mir-95-P4_3p |
mirBase accession | None |
Sequence |
41- CAAGUCUUAUUUGAGCACCUGU -63
Get sequence
|